代表性成果：

1. Chuangeng Chen^#, Ziqi Zhen^#, Meng Cui^#, Xiaoli Hu^#, Lei Yu^#, Fengxia Zhou, Xiaorong Yu, Dehui Yang, He Wu, Ying Cui, Xiang Li, Xudong Cui, Xinyue Liang, Yiyang Gao, Yuchen Liu, Yang Yu, Zhiwei Huang^*, Fan Zhang^*. The core cellular network modulates immune phenotype switching in hepatitis B. Sci Bull. 2025 Sep 15;70(17):2717-2720.

2. Chuangeng Chen^#, Dianshuang Zhou^#, Yue Gu^#, Cong Wang, Mengyan Zhang, Xiangyu Lin, Jie Xing, Hongli Wang, Yan Zhang^*. SEA version 3.0: a comprehensive extension and update of the Super-Enhancer archive. Nucleic Acids Res. 2020 Jan 8;48(D1):D198-D203.

3. Fan Zhang^#, Rui Gan^#, Ziqi Zhen^#, Xiaoli Hu^#, Xiang Li, Fengxia Zhou, Ying Liu, Chuangeng Chen, Shuangyu Xie, Bailing Zhang, Xiaoke Wu, Zhiwei Huang^*. Adaptive immune responses to SARS-CoV-2 infection in severe versus mild individuals. Signal Transduct Target Ther. 2020 Aug 14;5(1):156.

4. Fengxia Zhou^#, Xiaorong Yu^#, Rui Gan^#, Kuan Ren^#, Chuangeng Chen, Chunyan Ren, Meng Cui, Yuchen Liu, Yiyang Gao, Shouyu Wang, Mingyu Yin, Tengjin Huang, Zhiwei Huang, Fan Zhang^*. CRISPRimmunity: an interactive web server for CRISPR-associated Important Molecular events and Modulators Used in geNome edIting Tool identifying. Nucleic Acids Res. 2023 Jul 5;51(W1):W93-W107.

5. Yichun Xiong^#, Yanjun Wei^#, Yue Gu^#, Shumei Zhang, Jie Lyu, Bin Zhang, Chuangeng Chen, Jiang Zhu, Yihan Wang, Hongbo Liu, Yan Zhang^*. DiseaseMeth version 2.0: a major expansion and update of the human disease methylation database. Nucleic Acids Res. 2017 Jan 4;45(D1):D888-D895.

6. Fengxia Zhou^#, Han Yang^#, Yu Si^#, Rui Gan, Ling Yu, Chuangeng Chen, Chunyan Ren, Jiqiu Wu, Fan Zhang^*. PhageTailFinder: A tool for phage tail module detection and annotation. Front Genet. 2023 Jan 23:14:947466.

7. Rui Gan^#, FengXia Zhou^#, Yu Si^#, Han Yang, Chuangeng Chen, Chunyan Ren, Jiqiu Wu, Fan Zhang^*. DBSCAN-SWA: An Integrated Tool for Rapid Prophage Detection and Annotation. Front Genet. 2022 Apr 19:13:885048.

8. Yue Gu^#, Ce Ci^#, Xingda Zhang^#, Mu Su, Wenhua Lv, Chuangeng Chen, Hui Liu, Dongwei Zhang, Shumei Zhang, Yan Zhang^*. Prediction of circRNAs Based on the DNA Methylation-Mediated Feature Sponge Function in Breast Cancer. Front Bioeng Biotechnol. 2019 Nov 26:7:365.

9. Shumei Zhang^#, Yihan Wang^#, Yue Gu^#, Jiang Zhu, Ce Ci, Zhongfu Guo, Chuangeng Chen, Yanjun Wei, Wenhua Lv, Hongbo Liu, Dongwei Zhang, Yan Zhang^*. Specific breast cancer prognosis-subtype distinctions based on DNA methylation patterns. Mol Oncol. 2018 Jun;12(7):1047-1060.